Data access

Download static release data

OpenAntigens release snapshots include static flat files for the processed target index, release metadata, Open Targets disease associations when available, and per-target report artifacts.

Per-target files

Successful target pages link to raw report JSON and Markdown files when those files are included in the release snapshot. Report files contain construct-level sequences, homolog mappings, BLAST hits, PTM annotations, cysteine/furin warnings, disease context where enabled, and source evidence.

The compact TSV and JSON indexes locate target-level files programmatically. The detail_page, json_report, and markdown_report columns provide static file paths when available.

Download contents

Downloads are generated files from the current release snapshot. They can be opened directly from static hosting or local disk.

  • agdesign2_portal_index.tsv is the compact index for spreadsheet and scripting workflows.
  • agdesign2_portal_index.json contains the same compact index as JSON objects.
  • download_manifest.json describes included release files, formats, source notes, and index columns.
  • portal_metadata.json records release-level metadata such as build date, row counts, status counts, and topology counts.
  • Open Targets TSV/JSON files contain downloaded indirect and direct target-disease association scores when included in the release.

TSV schema

The TSV index is compact by design. Full report JSON files linked from the table contain construct-level sequences, alignments, warnings, figures, and source-specific evidence.

ColumnMeaning
entry_name, gene_symbol, protein_nameResolved portal target identifiers.
mouse_ortholog_*, mouse_refseq_accession, mouse_sequence_sourceMouse ortholog identifiers and sequence provenance when present; blank in human rows without mouse-derived metadata.
human_source_*Human source identifiers for derived portals or provenance-aware exports when present.
top_disease_name, top_disease_score, disease_countTop Open Targets indirect disease association in the index and number of downloaded associations for the target. Per-target report pages also list direct overall scores.
status, errorBatch processing state and failure message when present.
topology_bucket, ectodomainPortal track and mature secreted or extracellular design boundary.
construct_count, cross_reactivity_countNumber of reported constructs and BLAST hits used in the portal index.
has_alphafold_structure, has_pdb, has_interproAvailability flags for major evidence classes.
detail_page, json_report, markdown_reportRendered report page path and raw report filenames when available.